Atomic force microscopy reveals sphyingomyelin rafts (orange) protruding from a dioleoylphosphatidylcholine background (black) in a mica-supported lipid bilayer. Placental alkaline phosphatase (yellow peaks), a glycosylphosphatidylinositol-anchored protein, is shown to be almost exclusively raft associated. [From D. E. Saslowsky et al., 2002, J. Biol. Chem. 277:26966-26970.]
Prokaryotes, which represent the simplest and smallest cells, about 1-2 ^m in length, are surrounded by a plasma membrane but contain no internal membrane-limited subcompartments (see Figure 1-2a). Although DNA is concentrated in the center of these unicellular organisms, most enzymes and metabolites are thought to diffuse freely within the single internal aqueous compartment. Certain metabolic reactions, including protein synthesis and anaerobic glycolysis, take place there; others, such as the replication of DNA and the production of ATP, take place at the plasma membrane.
In the larger cells of eukaryotes, however, the rates of chemical reactions would be limited by the diffusion of small molecules if a cell were not partitioned into smaller subcom-partments termed organelles. Each organelle is surrounded by one or more biomembranes, and each type of organelle contains a unique complement of proteins—some embedded in its membrane(s), others in its aqueous interior space, or lumen. These proteins enable each organelle to carry out its characteristic cellular functions. The cytoplasm is the part of the cell outside the largest organelle, the nucleus. The cytosol, the aqueous part of the cytoplasm outside all of the organelles, also contains its own distinctive proteins.
All biomembranes form closed structures, separating the lumen on the inside from the outside, and are based on a similar bilayer structure. They control the movement of molecules between the inside and the outside of a cell and into and out of the organelles of eukaryotic cells. In accord with the importance of internal membranes to cell function, the total surface area of these membranes is roughly tenfold as great as that of the plasma membrane (Figure 5-1).
Although the basic architecture of all eukaryotic cells is constructed from membranes, organelles, and the cytosol, each type of cell exhibits a distinctive design defined by the shape of the cell and the location of its organelles. The structural basis of the unique design of each cell type lies in the cytoskeleton, a dense network of three classes of protein filaments that permeate the cytosol and mechanically support cellular membranes. Cytoskeletal proteins are among the most abundant proteins in a cell, and the enormous surface area of the cytoskeleton (see Figure 5-1) constitutes a scaffold to which particular sets of proteins and membranes are bound.
We begin our examination of cell architecture by considering the basic structure of biomembranes. The lipid components of membranes not only affect their shape and
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