References

Alonso, A. and Martin, P. (2005) A real-time PCR protocol to determine the number of amelogenin (X-Y) gene copies from forensic DNA samples. Methods Mol. Biol.

Alonso, A., Martin, P., Albarran, C., Garcia, P., Primorac, D., Garcia, O., Fernandez de Simon, L., Garcia-Hirschfeld, J., Sancho, M. and Fernandez-Piqueras, J. (2003) Specific quantification of human genomes from low copy number DNA samples in forensic and ancient DNA studies. Croat. Med. J. 44: 273-280.

Alonso, A., Martin, P., Albarran, C., Garcia, P., Garcia, O., de Simon, L.F., GarciaHirschfeld, J., Sancho, M., de La Rua, C. and Fernandez-Piqueras, J. (2004) Real-time PCR designs to estimate nuclear and mitochondrial DNA copy number in forensic and ancient DNA studies. Forensic Sci. Int. 139: 141-149.

Andréasson, H. and Allen, M. (2003) Rapid quantification and sex determination of forensic evidence materials. J. Forensic Sci. 48: 1280-1287.

Andréasson, H., Gyllensten, U. and Allen, M. (2002) Real-time DNA quantification of nuclear and mitochondrial DNA in forensic analysis. BioTechniques 33: 402-411.

Andréasson, H., Nilsson, M., Budowle, B., Lundberg, H. and Allen, M. (2006) Nuclear and mitochondrial DNA quantification of various forensic materials. Forensic Sci. Int. 164: 56-64.

Budowle, B., Johnson, M.D., Fraser, C.M., Leighton, T.J., Murch, R.S. and Chakraborty, R. (2005) Genetic analysis and attribution of microbial forensics evidence. Crit. Rev. Microbiol. 31: 233-254.

Gill, P., Whitaker, J., Flaxman, C., Brown, N. and Buckelton, J. (2000) An investigation of the rigor of interpretation rules for STRs derived from less than 100 pg of DNA. Forensic Sci. Int. 112: 17-40.

Green, R.L., Roinestad, I.C., Boland, C. and Hennessy, L.K. (2005) Developmental validation of the quantifiler real-time PCR kits for the quantification of human nuclear DNA samples. J. Forensic Sci. 50: 809-825.

Higuchi, R., Fockler, C., Dollinger, G. and Watson, R. (1993) Kinetic PCR: Real-time monitoring of DNA amplification reactions. Biotechnology 11: 1026-1030.

Holland, P.M., Abramson, R.D., Watson, R. and Gelfand, H. (1991) Detection of specific polymerase chain reaction product by utilizing the 5'-3'exonuclease activity of Thermus Aquaticus DNA polymerase. Proc. Natl. Acad. Sci. USA 88: 72767280.

Jobling, M.A. and Gill, P. (2004) Encoded evidence: DNA in forensic analysis. Nat. Rev. Genet. 5: 739-751.

Jones, S.W., Dobson, M.E., Francesconi, S.C., Schoske, R. and Crawford, R. (2005) DNA assays for detection, identification, and individualization of select agent microorganisms. Croat. Med. J. 46: 522-529.

Kline, M.C., Duewer, D.L., Redman, J.W. and Butler, J.M. (2005) Results from the NIST 2004 DNA Quantitation Study. J. Forensic Sci. 50: 570-578.

Menotti-Raymond, M., David, V., Wachter, L., Yuhki, N. and O'Brien, S.J. (2003) Quantitative polymerase chain reaction-based assay for estimating DNA yield extracted from domestic cat specimens. Croat. Med. J. 44: 327-331.

Morin, P.A., Chambers, K.E., Boesch, C. and Vigilant, L. (2001) Quantitative PCR analysis of DNA from noninvasive samples for accurate microsatellite genotyping of wild chimpanzees (Pan troglodytes). Mol. Ecol. 10: 1835-1844.

Morin, P.A., Nestler, A., Rubio-Cisneros, N.T., Robertson, K.M. and Mesnick, S.L. (2005) Interfamilial characterization of a region of the ZFX and ZFY genes facilitates sex determination in cetaceans and other mammals. Mol. Ecol. 14: 3275-3286.

Niederstatter, H., Coble, M.D., Grubwieser, P., Parsons, T.J. and Parson, W. (2006) Characterization of mtDNA SNP typing and mixture ratio assessment with simultane ous real-time PCR quantification of both allelic states. Int. J. Legal. Med. 120: 18-23.

Nicklas, J.A. and Buel, E. (2003) Development of an Alu-based, real-time PCR method for quantitation of human DNA in forensic samples. J. Forensic Sci. 48: 936-944.

Nussbaumer, C., Gharehbaghi-Schnell, E. and Korschineck, I. (2006) Messenger RNA profiling: a novel method for body fluid identification by real-time PCR. Forensic Sci. Int. 157: 181-186.

Poinar, H., Kuch, M., McDonald, G., Martin, P. and Pääbo, S. (2003) Nuclear gene sequences from a Late Pleistocene sloth coprolite. Curr. Bio. 13: 1150-1152.

Richard, M.L., Frappier, R.H. and Newman, J.C. (2003) Developmental validation of a real-time quantitative PCR assay for automated quantification of human DNA. J. Forensic Sci. 48: 1041-1046.

Sullivan, K.M., Mannucci, A., Kimpton, C.P. and Gill, P. (1993) A rapid and quantitative DNA sex test: fluorescence-based PCR analysis of X-Y homologous gene amelo-genin. BioTechniques 15: 637-641.

Swango, K.L., Timken, M.D., Chong, M.D. and Buoncristiani, M.R. (2006) A quantitative PCR assay for the assessment of DNA degradation in forensic samples. Forensic Sci. Int. 158: 14-26.

Timken, M.D., Swango, K.L., Orrego, C. and Buoncristiani, M.R. (2005) A duplex real-time qPCR assay for the quantification of human nuclear and mitochondrial DNA in forensic samples: implications for quantifying DNA in degraded samples. J. Forensic Sci. 50: 1044-1060.

Tyagi, S. and Kramer, F.R. (1996) Molecular beacons: probes that fluoresce upon hybridization. Nat. Biotechnol. 14: 303-308.

Walker, J.A., Hedges, D.J., Perodeau, B.P., Landry, K.E., Stoilova, N., Laborde, M.E., Shewale, J., Sinha, S.K. and Batzer, M.A. (2005) Multiplex polymerase chain reaction for simultaneous quantitation of human nuclear, mitochondrial, and male Y-chromosome DNA: application in human identification. Anal. Biochem. 337: 89-97.

Walker, J.A., Kilroy, G.E., Xing, J., Shewale, J., Sinha, S.K. and Batzer, M.A. (2003) Human DNA quantitation using Alu element-based polymerase chain reaction. Anal. Biochem. 315: 122-128.

Waye, J.S., Presley, L.A., Budowle, B., Shutler, G.G. and Fourney, R.M. (1989) A simple and sensitive method for quantifying human genomic DNA in forensic specimen extracts. Biotechniques 7: 852-855.

Waye, J.S. and Willard, H.F. (1986) Structure, organization, and sequence of alpha satellite DNA from human chromosome 17: evidence for evolution by unequal crossing-over and an ancestral pentamer repeat shared with the human X chromosome. Mol. Cell Biol. 6: 3156-3165.

Wetton, J.H., Tsang, C.S., Roney, C.A. and Spriggs, A.C. (2004) An extremely sensitive species-specific ARMS PCR test for the presence of tiger bone DNA. Forensic Sci. Int. 140: 139-145.

Whitcombe, D., Theaker, J., Guy, S.P., Brown, T. and Little, S. (1999) Detection of PCR products using self-probing amplicons and fluorescence. Nat. Biotech. 17: 804-807.

Was this article helpful?

0 0

Post a comment